Table S6 Cloning and identification of LcActin
S 6-1Total RNA isolated from Litchi chinensis Sonn. cv. Nuomici
S6-2 Primers and Reference
QLcactinF : ATGGCCGATGCTGAGGACATTC(5’→3’)
QLcactinR : TCAGAAGCACTTCCTGTGGACAATG(5’→3’)
Full-Length:1134bp
Reference:Xu JT, Zhang Z, Peng RH, et al. Cloning and analysis of MrACT from Malus micromalus. Journal of Fruit Science, 2008, 25(3): 289-292
S6-3 Electrophoresis result of PCR segment
Lane 1:DL2000 Marker;Lane 2:PCR segment
S6-4 DNA sequencing (Beijing Genomics Institute for sequencing)
Result:(Full-Length 1134bp, Red letters represent binding domains with the primers)
atggccgatgctgaggacattcagcctctcgtttgcgacaatggaactgggatggtgaaggctggatttgctggggatgatgcccccagggcggtgtttcccagtattgttggtcggccccgacacactggtgtgatggttggtatgggtcagaaggatgcctatgttggtgatgaggcccaatcgaaaagaggtattcttaccttgaaatacccgattgaacatggtattgtcagcaactgggatgatatggaaaagatctggcatcacactttctacaatgagcttcgtgttgctccagaagagcacccggtgcttcttactgaggctcctttaaatcccaaggccaacagagagaagatgacccagattatgtttgaaacttttaatgtgcctgccatgtatgttgccatccaggccgtcctctctctttacgccagtggtcgcacaactggtatcgtgctggattctggtgatggtgtgtctcatactgtgccaatctatgaaggatatgcccttcctcatgctattctccgtttggacctggctggtcgtgatctcaccgatgcattgatgaagattctgaccgagagaggttacatgtttaccaccactgccgaacgggaaattgtccgtgacatgaaagagaagcttgcctatgtcgcgctagactatgagcaggaacttgagactgccaagagcagctcctctgtggagaagaactatgagttacctgatggtcaggtcatcactattggagctgagagattccgttgcccagaagtcctcttccagccatctctcatcggaatggaagctgctggtatccatgagactacctacaactccatcatgaagtgtgatgtggatatcaggaaggatctctatggtaacattgtgctcagtggtggttctactatgttccctggtattgccgaccgtatgagcaaggaaatcactgcccttgccccaagcagcatgaagatcaaggttgtggctccacctgagagaaaatacagtgtctggattggaggatcaatcctcgcatctctcagcaccttccaacagatgtggatttcaaaggatgagtacgacgagtctggtccatccattgtccacaggaagtgcttctga
S6-5 Alignment and phylogenetic analysis
Accessions
|
Description
|
Max
score
|
Total score
|
Query coverage
|
E value
|
Max ident
|
AAP73457.1
|
actin [Gossypium hirsutum]
|
754
|
754
|
99%
|
0.0
|
99%
|
ABR45727.1
|
ACT1 [Actinidia deliciosa]
|
753
|
753
|
99%
|
0.0
|
99%
|
ADA70361.1
|
actin [Persea americana]
|
749
|
749
|
99%
|
0.0
|
98%
|
AAA80356.1
|
actin-2 [Arabidopsis thaliana]
|
749
|
749
|
99%
|
0.0
|
98%
|
ACN54541.1
|
actin [Carica papaya]
|
748
|
748
|
99%
|
0.0
|
98%
|
ACJ04738.1
|
actin [Sedum alfredii]
|
743
|
743
|
99%
|
0.0
|
97%
|
NP_001054419.1
|
Os05g0106600 [Oryza sativa Japonica Group]
|
743
|
743
|
99%
|
0.0
|
97%
|
AAW78915.1
|
actin [Triticum aestivum]
|
741
|
741
|
99%
|
0.0
|
96%
|
BAD27408.1
|
actin [Nicotiana tabacum]
|
741
|
741
|
99%
|
0.0
|
97%
|
This gene sequence has been submitted to the NCBI GenBank and the accession number is HQ615689. |