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Potential error sequences


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Potential error sequences

reasons

JF342908 Canis lupus

Shallow interspecific divergence with Canis latrans

EU835716 Alces alces

Shallow interspecific divergence with Rangifer tarandus

JF443316- JF443322 Odocoileus hemionus

Shallow interspecific divergence with Odocoileus virginianus

JN632595 Alces alce

Shallow interspecific divergence with Alces americanus

JN632660 Mazama nemorivaga

Shallow interspecific divergence with Mazama gouazoupira

HM204518 Cervus elaphus

HM204517 Cervus eldi

HM204514-HM204516,GQ329016-GQ329017, EF035448, NC_008414 Rusa unicolor

HM049636 Cervus albirostris

NC_016707 Przewalskium albirostris

HM204510 Cervus timorensis



Shallow interspecific divergence with Cervus nippon

JN632626 Connochaetes gnou

Shallow interspecific divergence with Connochaetes taurinus

HQ644111, JN632621 Cephalophus rufilatus

Shallow interspecific divergence with Cephalophus nigrifrons

JN632591Addax nasomaculatus

Shallow interspecific divergence with Oryx dammah

JN632604 Bos gaurus

HQ269429 Bos frontalis



Shallow interspecific divergence with each other

Bos taurus, Bos javanicus, Bos indicus, Bos primigenius

Shallow interspecific divergence with each other

DQ534055, GU117615 Lama pacos

Shallow interspecific divergence with Vicugna vicugna

AP003426, NC_012102, GU117612 Lama glama

Shallow interspecific divergence with Lama pacos

AJ277029 Physeter macrocephalus

Shallow interspecific divergence with Physeter catodon

JF442786 Mesoplodon stejnegeri

Shallow interspecific divergence with Ziphius cavirostris

EF568613Ziphius cavirostris

EU496313 Mesoplodon europaeus



Shallow interspecific divergence with each other

JF442782 Delphinus delphis

Shallow interspecific divergence with Phocoenoides dalli

JF442789 Phocoena phocoena

Shallow interspecific divergence with Delphinapterus leucas

Delphinus capensis

Delphinus delphis

Shallow interspecific divergence with each other

EF090643Stenella coeruleoalba

Shallow interspecific divergence with Delphinus delphis

EF568714 Stenella frontalis

Shallow interspecific divergence with Stenella clymene

EU496342 Stenella coeruleoalba

Shallow interspecific divergence with Stenella clymene

JF339973Globicephala melas

Shallow interspecific divergence with Orcinus orca

AB547250 Bos taurus

Deep intraspecific divergence

EF636539 Sorex granarius

Shallow interspecific divergence with Sorex araneus

GU981242 Episoriculus macrurus

Shallow interspecific divergence with Episoriculus caudatus

GU981225 Crocidura fuliginosa

JF444469 Suncus murinus



Shallow interspecific divergence with each other

JF436025 Sorex caecutiens

Shallow interspecific divergence with Sorex cinereus

NC_006516 Metachirus nudicaudatus

Shallow interspecific divergence with Didelphis marsupialis

JF912199, NC_015529 Mammuthus columbi

Shallow interspecific divergence with Mammuthus primigenius

JF444474 Tapirus terrestris

JF444473 Tapirus indicus



Shallow interspecific divergence with each other

JF445287 Rattus tanezumi

Shallow interspecific divergence with Rattus andamanensis

JF445260 Rattus rattus

Shallow interspecific divergence with Rattus andamanensis

FR775808, FR775814, FR775818, FR775809 Rattus tiomanicus

Shallow interspecific divergence with Rattus andamanensis

JF459864, JF459865 Rattus rattus

HM217522, EF186628, EF186629 Rattus tiomanicus



Shallow interspecific divergence with each other

EF156861, EU107500 Chaetodipus intermedius

JF444291, JF444292 Chaetodipus penicillatus



Shallow interspecific divergence with each other

JQ601445 Tamias minimus

Shallow interspecific divergence with Tamias striatus

JQ601192 Proechimys cuvieri

Shallow interspecific divergence with Proechimys guyannensis

JQ601191 Proechimys guyannensis

Shallow interspecific divergence with Proechimys cuvieri

JQ601186 Proechimys guyannensis

Shallow interspecific divergence with Hylaeamys megacephalus

JQ601228 Proechimys cuvieri

Shallow interspecific divergence with Hylaeamys megacephalus

JF492254, JF492170 Handleyomys rostratus

Shallow interspecific divergence with Handleyomys alfaroi

JF446230 Reithrodontomys gracilis

Shallow interspecific divergence with Ototylomys phyllotis

JF446208, JF446209, JF446191 Reithrodontomys gracilis

Shallow interspecific divergence with Reithrodontomys spectabilis

JQ600683-JQ600687 Peromyscus nudipes

JQ600989-JQ600991, JQ600987 Peromyscus gymnotis



Shallow interspecific divergence with each other

HM165298 Neodon irene

Shallow interspecific divergence with Microtus limnophilus

DQ0155676 Microtus rossiaemeridionalis

NC_008064 Microtus levis



Shallow interspecific divergence with each other

HM165290 Eothenomys miletus

Shallow interspecific divergence with Eothenomys custos

HM165312 Eothenomys cachinus

HM165316 Eothenomys eleusis



Shallow interspecific divergence with each other

JF499324 Myodes glareolus

Shallow interspecific divergence with Myodes rutilus

NC_012461 Rattus praetor

EF186569 Rattus novaeguineae



Shallow interspecific divergence with each other

JF459710 Maxomys ochraceiventer

Shallow interspecific divergence with Maxomys rajah

JQ667986 Praomys rostratus

Shallow interspecific divergence with Praomys tullbergi

GQ121052 Pipanacoctomys aureus

Shallow interspecific divergence with Octomys mimax

Ctenomys lami

Ctenomys minutus

Shallow interspecific divergence with each other

HQ693908, HQ693907 Chaetodipus arenarius

Shallow interspecific divergence with Chaetodipus dalquesti

EF156848 Heteromys anomalus

deep intraspecific divergence

JF459227 Phyllostomus elongatus

deep intraspecific divergence

JF444069 Rhinolophus pusillus

Shallow interspecific divergence with Rhinolophus lepidus

JF446032 Lonchorhina aurita

Shallow interspecific divergence with Micronycteris megalotis

JF443987 Myotis muricola

Shallow interspecific divergence with Myotis horsfieldii

HQ689950 Pteropus samoensis

Shallow interspecific divergence with Myotis volans

JF448053 Lonchophylla thomasi

deep intraspecific divergence

JF459227 Phyllostomus elongatus

deep intraspecific divergence

HQ919729 Sturnira lilium

Shallow interspecific divergence with Sturnira tildae

JF459166 Glossophaga soricina

Deep intraspecific divergence

JF459228 Phyllostomus hastatus

Deep intraspecific divergence

HM541798, HM541797, HM541796, HM541799, HM541801, HM541800 Rhinolophus siamensis

Shallow interspecific divergence with Rhinolophus macrotis

JF444044, JF444047 Rhinolophus cf. lepidus

Shallow interspecific divergence with Rhinolophus cf. pusillus

JF444098 Rhinolophus shameli

Shallow interspecific divergence with Rhinolophus chaseni

JF444099, JF444100 Rhinolophus shameli

Shallow interspecific divergence with Rhinolophus stheno

HM914945, HM914955, HM914956 Hipposideros grandis

Shallow interspecific divergence with Hipposideros larvatus

HM540204, HM540205 Cynopterus horsfieldii

HM540202, HM540203 Cynopterus brachyotis



Shallow interspecific divergence with each other

JF442389, JF442390 Epomophorus labiatus

Shallow interspecific divergence with Epomophorus gambianus

JF443981 Myotis muricola

HM540286 Harpiola isodon



Shallow interspecific divergence with each other

JN311814 Peropteryx macrotis

Shallow interspecific divergence with Cormura brevirostris

JF459204 Molossops temminckii

Shallow interspecific divergence with Molossops neglectus

HM914921 Tylonycteris robustula

Shallow interspecific divergence with Tylonycteris pachypus

GU723154 Lasiurus seminolus

GU723151 Lasiurus borealis



Shallow interspecific divergence with each other

GU72321 Myotis ciliolabrum

Shallow interspecific divergence with Myotis californicus

GU723209 Myotis californicus

GU723210 Myotis ciliolabrum



Shallow interspecific divergence with each other

JX008074 Myotis nipalensis

Shallow interspecific divergence with Myotis aurascens

Myotis muricola

Myotis ater

Shallow interspecific divergence with each other

Artibeus cinereus

Artibeus glaucus

Shallow interspecific divergence with each other

JF459220 Phyllostomus discolor

Shallow interspecific divergence with Artibeus cinereus


JF459067 Artibeus cinereus

deep intraspecific divergence

JF459487 Pteronotus gymnonotus

Shallow interspecific divergence with Pteronotus davyi

JX008071 Myotis mystacinus

deep intraspecific divergence

Myotis myotis

Myotis blythii

Shallow interspecific divergence with each other

JF444936 Molossus rufus

deep intraspecific divergence

FR856759 Nyctalus leisleri

Shallow interspecific divergence with Nyctalus noctula

JX008080 Pipistrellus kuhlii

Shallow interspecific divergence with Pipistrellus pipistrellus

HM102310 Pongo pygmaeus

Shallow interspecific divergence with Pongo abelii

HQ622760 Hylobates agilis

Shallow interspecific divergence with Hylobates muelleri

AY972708 Hylobates agilis

Shallow interspecific divergence with Hylobates lar

JQ821838, NC_018059 Rhinopithecus strykeri

Shallow interspecific divergence with Rhinopithecus bieti

AY972692 Colobus polykomos

EU185734 Colobus guereza



Shallow interspecific divergence with each other

AY671790 Cercopithecus cephus

deep intraspecific divergence

EF597500, NC_009747, EF597501 Chlorocebus pygerythrus

Shallow interspecific divergence with Chlorocebus aethiops

EF597503, NC_008066 Chlorocebus sabaeus

Shallow interspecific divergence with Chlorocebus aethiops

Papio anubis

Papio cynocephalus

Papio hamadryas

Shallow interspecific divergence with each other

Saimiri sciureus

Saimiri boliviensis

Shallow interspecific divergence with each other

FJ785421 Aotus lemurinus

AY250707, HM102288 Aotus trivirgatus



Shallow interspecific divergence with each other

GQ259899 Nycticebus bengalensis

NC_002765, AJ309867 Nycticebus coucang



Shallow interspecific divergence with each other

GQ259900 Nycticebus coucang

GQ259903 Nycticebus javanicus



Shallow interspecific divergence with each other

AY671787 Otolemur garnettii

Shallow interspecific divergence with Otolemur crassicaudatus

AY972682 Galago moholi

Shallow interspecific divergence with Galago senegalensis

Lepus mandshuricus

Lepus timidus



Lepus capensis

Shallow interspecific divergence with each other

JQ601063 Sylvilagus floridanus

deep intraspecific divergence

DQ347427 Ochotona alpina

deep intraspecific divergence


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