Additional file 2

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Additional file 2 Accession numbers of the CCD genes used in the phylogenetic analysis

S. No.	Organism	CCD Group	NCBI accession no.
1	Coffea arabica	CaCCD1	gi\|76560804
2	Coffea canephora	CcCCD1	gi\|76560796
3	Crocus sativus	CsCCD1a	gi\|17907098
4	Crocus sativus	CsCCD1b	gi\|667794902
5	Diospyros kaki	DkCCD1	gi\|379063012
6	Eucalyptus grandis	EgCCD1	gi\|702426515
7	Fragaria vesca	FvCCD1	gi\|470141642
8	Ipomoea sp. Kenyan	IkCCD1	gi\|262036882
9	Lactuca sativa	LsCCD1	gi\|84579416
10	Lycium chinense	LcCCD1	gi\|569533233
11	Malus domestica	MdCCD1	gi\|657966949
12	Manihot esculenta	MeCCD1	gi\|307592509
13	Medicago truncatula	MtCCD1	gi\|195972576
14	Momordica charantia	McCCD1	gi\|408794951
15	Nelumbo nucifera	NcCCD1	gi\|720078124
16	Osmanthus fragrans	OsCCD1	gi\|294679657
17	Petunia x hybrida	PhCCD1	gi\|49659730
18	Populus trichocarpa	PtCCD1	gi\|566186637
19	Prunus mume	PmCCD1	gi\|645250526
20	Rosa x damascena	RdCCD1	gi\|163881523
21	Scutellaria baicalensis	SbCCD1	gi\|508083244
22	Setaria italica	SiCCD1	gi\|514755705
23	Solanum tuberosum	StCCD1	gi\|565357220
24	Theobroma cacao	TcCCD1	gi\|590724612
25	Vitis vinifera	VvCCD1	gi\|387763758
26	Zea mays	ZmCCD1	gi\|107857142
41	Beta vulgaris	BvCCD4	gi\|731332791
27	Bixa orellana	BoLCCO	gi\|40642651
28	Crocus sativus	CsCCD4a	gi\|188529515
29	Crocus sativus	CsCCD4b	gi\|188529517
30	Crocus sativus	CsCCD4c	gi\|346722086
31	Cucumis melo	CmCCD4	gi\|659101954
32	Cucumis sativus	CusCCD4	gi\|449502172
33	Glycine max	GmCCD4	gi\|356495283
34	Momordica charantia	McCCD4	gi\|40879495
35	Nelumbo nucifera	NnCCD4	gi\|720061328
36	Oryza brachyantha	ObCCD4	gi\|573920306
37	Osmanthus fragrans	OsCCD4	gi\|164551336
38	Setaria italica	SiCCD4	gi\|514716865
39	Solanum lycopersicum	SlCCD4	gi\|723726437
40	Vitis vinifera	VvCCD4a	gi\|387763754
41	Vitis vinifera	VvCCD4b	gi\|532020843
42	Actinidia chinensis	AcCCD7	gi\|310896479
43	Brachypodium distachyon	BdCCD7	gi\|357168137
44	Cicer arietinum	CaCCD7	gi\|502166602
45	Crocus sativus	CsCCD7	gi\|663160914
46	Elaeis guineensis	EgCCD7	gi\|743829381
47	Fragaria vesca	FvCCD7	gi\|470142568
48	Glycine max	GmCCD7	gi\|356495887
49	Malus baccata	MbCCD7	gi\|586616522
50	Musa acuminata	MaCCD7	gi\|695074514
51	Nicotiana tomentosiformis	NtCCD7	gi\|697167571
52	Orobanche ramosa	OrCCD7	gi\|350605181
53	Oryza brachyantha	ObCCD7	gi\|573940410
54	Petunia x hybrida	PhCCD7	gi\|261863854
55	Phoenix dactylifera	PdCCD7	gi\|672144503
56	Prunus mume	PmCCD7	gi\|645253531
57	Sesamum indicum	SeiCCD7	gi\|747045524
58	Setaria italica	SiCCD7	gi\|514803094
59	Solanum tuberosum	StCCD7	gi\|565362379
60	Theobroma cacao	TcCCD7	gi\|590723573
61	Trifolium repens	TrCCD7	gi\|601036844
62	Vitis vinifera	VvCCD7	gi\|225453464
63	Actinidia chinensis	AcCCD8	gi\|310896477
64	Cicer arietinum	CaCCD8	gi\|502131934
65	Crocus sativus	CsCCD8a	gi\|663160938
66	Crocus sativus	CsCCD8b	gi\|663160921
67	Cucumis melo	CmCCD8	gi\|659088500
68	Elaeis guineensis	EgCCD8	gi\|743796224
69	Glycine max	GmCCD8b	gi\|571449734
70	Malus domestica	MdCCD8	gi\|658050868
71	Malus hupehensis	MhCCD8	gi\|683524549
72	Musa acuminata	MaCCD8	gi\|695038997
73	Nelumbo nucifera	NnCCD8	gi\|719979724
74	Phoenix dactylifera	PdCCD8	gi\|672169213
75	Pyrus x bretschneideri	PbCCD8	gi\|694382949
76	Sesamum indicum	SeiCCD8	gi\|747041043
77	Setaria italica	SiCCD8a	gi\|514790829
78	Setaria italica	SiCCD8	gi\|514790825
79	Solanum tuberosum	StCCD8	gi\|565387981
80	Vitis vinifera	VvCCD8	gi\|225429936
81	Brachypodium distachyon	BdNCED1	gi\|357120366
82	Crocus sativus	CsNCED	gi\|188011139
83	Daucus carota	DcNCED	gi\|79155257
84	Elaeis guineensis	EgNCED	gi\|743761243
85	Gladiolus hybrid	GhNCED	gi\|334361424
86	Lilium longiflorum	llNCED	gi\|478348137
87	Lilium speciosum	LsNCED	gi\|260176996
88	Lycium chinense	LcNCED	gi\|727924617
89	Musa acuminata	MaNCED	gi\|695038388
90	Narcissus tazetta	NtNCED	gi\|478427863
91	Nelumbo nucifera	NnNCED1	gi\|720098791
92	Nicotiana tabacum	NtNCED3	gi\|399932285
93	Pisum sativum	PsNCED2	gi\|22335699
94	Populus trichocarpa	PtNCED	gi\|224114842
95	Prunus mume	PmNCED	gi\|645238050
96	Ricinus communis	RcNCED	gi\|255557269
97	Sesamum indicum	SeiNCED	gi\|747100101
98	Setaria italica	SiNCED1	gi\|514823384
99	Solanum lycopersicum	SlNCED	gi\|350535531
100	Sorghum bicolor	ScVP14	gi\|559100101
101	Triticum aestivum	TaNCED	gi\|431812563
102	Vitis vinifera	VvNCED	gi\|526118124
103	Zea mays	ZmVP14	gi\|414871750